| Plum Island River | Essex, MA | 6 miles | SE |
| Swains Creek | Rockingham, NH | 11.3 miles | NE |
| Eastman Slough | Rockingham, NH | 11.4 miles | NE |
| Blind Creek | Rockingham, NH | 12.2 miles | NE |
| Annisquam River | Essex, MA | 14.9 miles | SE |
| Inner Gut | Essex, MA | 20.6 miles | SE |
| Outer Gut | Essex, MA | 20.8 miles | SE |
| Black Rock Channel | Plymouth, MA | 29.2 miles | SE |
| Western Way | Suffolk, MA | 30.3 miles | SW |
| Hull Gut | Plymouth, MA | 31.3 miles | SE |
| West Gut | Norfolk, MA | 32.7 miles | SW |
| Briley Brook | York, ME | 33.2 miles | NE |
| Western Channel | Norfolk, MA | 34.9 miles | SE |
| Eastern Channel | Plymouth, MA | 35.2 miles | SE |
| New Inlet | Plymouth, MA | 42.4 miles | SE |
| Cowyard | Plymouth, MA | 54.2 miles | SE |
| Narrows | Worcester, MA | 68.1 miles | SW |
| Gibbs Narrows | Barnstable, MA | 70.6 miles | SE |
| Cohasset Narrows | Barnstable, MA | 71.5 miles | SE |
| Bristol Narrows | Bristol, RI | 74.9 miles | SW |
| The Narrows | Bristol, MA | 74.9 miles | SW |
| Pocasset Harbor | Barnstable, MA | 75.8 miles | SE |
| Mill Gut | Bristol, RI | 76.8 miles | SW |
| The Gut | Newport, RI | 79.9 miles | SW |
| Jaquish Gut | Cumberland, ME | 81.4 miles | NE |
| Wills Gut | Cumberland, ME | 83.5 miles | NE |
| Seapuit River | Barnstable, MA | 83.5 miles | SE |
| The Narrows | Barnstable, MA | 85.9 miles | SE |
| Hog Island Creek | Barnstable, MA | 85.9 miles | SE |
| Broad Creek | Barnstable, MA | 86.2 miles | SE |
| Gate of Canso | Barnstable, MA | 86.4 miles | SE |
| Westport River | Bristol, MA | 86.4 miles | SW |
| Northwest Gutter | Dukes, MA | 86.6 miles | SE |
| The Gut | Newport, RI | 86.7 miles | SW |
| East Gutter | Dukes, MA | 87.2 miles | SE |
| Middle Gate | Dukes, MA | 87.3 miles | SE |
| West Gutter | Dukes, MA | 87.5 miles | SE |
| Molly Gut | Cumberland, ME | 89.4 miles | NE |
| Robinsons Hole | Dukes, MA | 90.5 miles | SE |
| Vineyard Sound | Dukes, MA | 91.2 miles | SE |
| Salls Drain | Barnstable, MA | 92.5 miles | SE |
| The Narrows | Washington, RI | 94.6 miles | SW |
| Cape Poge Gut | Dukes, MA | 96.9 miles | SE |
| The Narrows | Washington, RI | 97 miles | SW |
| Sasanoa River | Lincoln, ME | 97.6 miles | NE |
| Townsend Gut | Lincoln, ME | 98.9 miles | NE |
| The Breachway | Washington, RI | 100 miles | SW |
| Back River | Lincoln, ME | 101.7 miles | NE |
| The Gut | Lincoln, ME | 103 miles | NE |
| Charlestown Breachway | Washington, RI | 103.4 miles | SW |
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