| Long Meadow Brook | Middlesex, MA | 1.4 miles | SW |
| Sandy Brook | Middlesex, MA | 1.4 miles | SW |
| Vine Brook | Middlesex, MA | 2.4 miles | SW |
| Willow Brook | Middlesex, MA | 2.4 miles | NE |
| McKee Brook | Middlesex, MA | 2.4 miles | NW |
| Little Brook | Middlesex, MA | 2.4 miles | SE |
| Beaver Brook | Middlesex, MA | 2.4 miles | NW |
| Jones Brook | Middlesex, MA | 3.1 miles | NW |
| Cummings Brook | Middlesex, MA | 3.1 miles | SE |
| Halls Brook | Middlesex, MA | 3.1 miles | NE |
| Shaker Glen Brook | Middlesex, MA | 3.1 miles | SE |
| Spring Brook | Middlesex, MA | 3.1 miles | SW |
| Elm Brook | Middlesex, MA | 3.4 miles | SW |
| Fowle Brook | Middlesex, MA | 3.4 miles | SE |
| Sucker Brook | Middlesex, MA | 3.6 miles | SE |
| Mill Brook | Middlesex, MA | 3.9 miles | NE |
| Kiln Brook | Middlesex, MA | 4.1 miles | SW |
| Lubbers Brook | Middlesex, MA | 4.3 miles | NE |
| Maple Meadow Brook | Middlesex, MA | 4.3 miles | NE |
| Sweetwater Brook | Middlesex, MA | 4.3 miles | SE |
| Content Brook | Middlesex, MA | 4.9 miles | NW |
| Horn Pond Brook | Middlesex, MA | 4.9 miles | SE |
| Munroe Brook | Middlesex, MA | 5.3 miles | SE |
| Vine Brook | Middlesex, MA | 5.3 miles | SW |
| Heath Brook | Middlesex, MA | 5.5 miles | NW |
| Aberjona River | Middlesex, MA | 5.5 miles | SE |
| Mill Brook | Middlesex, MA | 5.5 miles | NW |
| Pages Brook | Middlesex, MA | 5.5 miles | NW |
| Bear Meadow Brook | Essex, MA | 5.8 miles | NE |
| Strong Water Brook | Middlesex, MA | 6.1 miles | NE |
| Smelt Brook | Middlesex, MA | 6.3 miles | SE |
| Brooks Brook | Middlesex, MA | 6.3 miles | SE |
| Mill Brook | Middlesex, MA | 6.6 miles | SE |
| Martins Brook | Middlesex, MA | 6.7 miles | NE |
| Spot Pond Brook | Middlesex, MA | 6.7 miles | SE |
| Sawmill Brook | Middlesex, MA | 7 miles | SW |
| Floyds Brook | Middlesex, MA | 7.1 miles | SE |
| Rapers Brook | Middlesex, MA | 7.2 miles | NE |
| Skug River | Essex, MA | 7.4 miles | NE |
| Meadow Brook | Middlesex, MA | 7.4 miles | NW |
| Alewife Brook | Middlesex, MA | 7.4 miles | SE |
| Winn Brook | Middlesex, MA | 7.9 miles | SE |
| Patch Meadow Brook | Middlesex, MA | 7.9 miles | NW |
| Intervale Brook | Middlesex, MA | 8 miles | SE |
| Beaverdam Brook | Essex, MA | 8.1 miles | NE |
| House Brook | Middlesex, MA | 8.1 miles | NW |
| Mill Brook | Middlesex, MA | 8.2 miles | SW |
| Webb Brook | Middlesex, MA | 8.2 miles | SW |
| Little River | Middlesex, MA | 8.2 miles | SE |
| Mill River | Middlesex, MA | 8.2 miles | SE |
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